Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm14494-201ENSMUST00000118786 435 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Mir3113-201ENSMUST00000175478 76 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Mir8117-201ENSMUST00000184773 107 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm44492-201ENSMUST00000197012 141 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Gm10154-201ENSMUST00000084445 354 ntBASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4lE9Q2N0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4lE9Q2N0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4lE9Q2N0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4lE9Q2N0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4lE9Q2N0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cpsf4lE9Q2N0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4lE9Q2N0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm27301-201ENSMUST00000184012 127 ntBASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm5264-201ENSMUST00000190584 848 ntBASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4lE9Q2N0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms