Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Gm13689-201ENSMUST00000119360 685 ntBASIC20.18■□□□□ 0.82
Chd2E9PZM4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Gm4804-201ENSMUST00000182234 999 ntBASIC20.18■□□□□ 0.82
Chd2E9PZM4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC20.18■□□□□ 0.82
Chd2E9PZM4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.18■□□□□ 0.82
Chd2E9PZM4 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.18■□□□□ 0.82
Chd2E9PZM4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd2E9PZM4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.17■□□□□ 0.82
Chd2E9PZM4 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.17■□□□□ 0.82
Chd2E9PZM4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Olfr582-201ENSMUST00000098212 960 ntBASIC20.17■□□□□ 0.82
Chd2E9PZM4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chd2E9PZM4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd2E9PZM4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.17■□□□□ 0.82
Chd2E9PZM4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gm14723-201ENSMUST00000118686 215 ntBASIC20.16■□□□□ 0.82
Chd2E9PZM4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gm24644-201ENSMUST00000157114 139 ntBASIC20.16■□□□□ 0.82
Chd2E9PZM4 Mir8109-201ENSMUST00000184375 117 ntBASIC20.16■□□□□ 0.82
Chd2E9PZM4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Gm44974-201ENSMUST00000206387 1279 ntBASIC20.16■□□□□ 0.82
Chd2E9PZM4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chd2E9PZM4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.15■□□□□ 0.82
Chd2E9PZM4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd2E9PZM4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Gm6983-201ENSMUST00000214912 628 ntBASIC20.15■□□□□ 0.82
Chd2E9PZM4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 CT009713.10-202ENSMUST00000225734 696 ntBASIC20.15■□□□□ 0.82
Chd2E9PZM4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd2E9PZM4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd2E9PZM4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Chd2E9PZM4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd2E9PZM4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd2E9PZM4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Gm43118-201ENSMUST00000199149 775 ntBASIC20.14■□□□□ 0.81
Chd2E9PZM4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.14■□□□□ 0.81
Chd2E9PZM4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Gm7553-201ENSMUST00000185805 1426 ntBASIC20.14■□□□□ 0.81
Chd2E9PZM4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd2E9PZM4 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.13■□□□□ 0.81
Chd2E9PZM4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC20.13■□□□□ 0.81
Chd2E9PZM4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd2E9PZM4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms