Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm43818-201ENSMUST00000200605 466 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm3508-201ENSMUST00000186012 792 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm10752-201ENSMUST00000218348 729 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm8227-201ENSMUST00000223306 571 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a3E9PWQ3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm13786-201ENSMUST00000122371 333 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm8285-201ENSMUST00000208293 759 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm5051-201ENSMUST00000204085 485 ntBASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Col6a3E9PWQ3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm24990-201ENSMUST00000157406 323 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm42627-201ENSMUST00000197347 224 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms