Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Gm12742-201ENSMUST00000117326 410 ntBASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Gm13226-201ENSMUST00000117838 404 ntBASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Mir1894-201ENSMUST00000122802 81 ntBASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Gm10275-202ENSMUST00000168697 495 ntBASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 AC154806.6-201ENSMUST00000228192 202 ntBASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Gm10275-201ENSMUST00000092620 635 ntBASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC20.67■□□□□ 0.9
Hfm1D3Z4R1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Gm6244-201ENSMUST00000178732 841 ntBASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Gm27839-201ENSMUST00000184242 106 ntBASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hfm1D3Z4R1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Gm13392-201ENSMUST00000117708 150 ntBASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Gm2495-201ENSMUST00000191160 466 ntBASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hfm1D3Z4R1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
Hfm1D3Z4R1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hfm1D3Z4R1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms