Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Mir7085-201ENSMUST00000184353 66 ntBASIC13.39□□□□□ -0.27
Shank1D3YZU1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.39□□□□□ -0.27
Shank1D3YZU1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Gm44719-201ENSMUST00000206404 149 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Gm15483-201ENSMUST00000120338 456 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.38□□□□□ -0.27
Shank1D3YZU1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shank1D3YZU1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Gm27838-201ENSMUST00000184829 128 ntBASIC13.37□□□□□ -0.27
Shank1D3YZU1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.37□□□□□ -0.27
Shank1D3YZU1 Syt7-204ENSMUST00000223586 1344 ntBASIC13.37□□□□□ -0.27
Shank1D3YZU1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.37□□□□□ -0.27
Shank1D3YZU1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shank1D3YZU1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.36□□□□□ -0.27
Shank1D3YZU1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.36□□□□□ -0.27
Shank1D3YZU1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Asic1-205ENSMUST00000228185 1818 ntBASIC13.36□□□□□ -0.27
Shank1D3YZU1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms