Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Sybu-209ENSMUST00000228639 4113 ntBASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Gm12428-201ENSMUST00000119844 727 ntBASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.02■□□□□ 0.15
Sh2d4bA6X942 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Asic1-205ENSMUST00000228185 1818 ntBASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Gm27622-201ENSMUST00000183779 60 ntBASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Gm7774-201ENSMUST00000200064 533 ntBASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.01■□□□□ 0.15
Sh2d4bA6X942 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm6257-201ENSMUST00000163864 910 ntBASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm10253-201ENSMUST00000194270 940 ntBASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16■□□□□ 0.15
Sh2d4bA6X942 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16■□□□□ 0.15
Sh2d4bA6X942 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Sh2d4bA6X942 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh2d4bA6X942 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sh2d4bA6X942 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms