Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a5A6H584 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.18□□□□□ -0.62
Col6a5A6H584 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Col6a5A6H584 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.18□□□□□ -0.62
Col6a5A6H584 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.18□□□□□ -0.62
Col6a5A6H584 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a5A6H584 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Col6a5A6H584 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a5A6H584 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.18□□□□□ -0.62
Col6a5A6H584 AU022133-201ENSMUST00000200601 873 ntBASIC11.18□□□□□ -0.62
Col6a5A6H584 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Gm6091-201ENSMUST00000098307 165 ntBASIC11.18□□□□□ -0.62
Col6a5A6H584 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a5A6H584 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm29649-201ENSMUST00000185649 419 ntBASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm43822-201ENSMUST00000200285 476 ntBASIC11.17□□□□□ -0.62
Col6a5A6H584 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.17□□□□□ -0.62
Col6a5A6H584 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm27486-201ENSMUST00000184923 80 ntBASIC11.17□□□□□ -0.62
Col6a5A6H584 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.17□□□□□ -0.62
Col6a5A6H584 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.17□□□□□ -0.62
Col6a5A6H584 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col6a5A6H584 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm44364-201ENSMUST00000198368 141 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm7287-201ENSMUST00000205267 602 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm45865-201ENSMUST00000211815 945 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Nsd1-205ENSMUST00000224693 852 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a5A6H584 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms