Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Gm6089-201ENSMUST00000197666 938 ntBASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc112A0AUP1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc112A0AUP1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Ank2-226ENSMUST00000189368 339 ntBASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc112A0AUP1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms