Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lnp1A0A1B0GSK3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lnp1A0A1B0GSK3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm18246-201ENSMUST00000221023 728 ntBASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lnp1A0A1B0GSK3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms