Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm11355-201ENSMUST00000121120 306 ntBASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm20760-201ENSMUST00000179197 648 ntBASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm27389-201ENSMUST00000183622 195 ntBASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv3A0A0A6YYE2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Mir5130-201ENSMUST00000175160 84 ntBASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv3A0A0A6YYE2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm30025-201ENSMUST00000218555 728 ntBASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms