Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm8097-201ENSMUST00000117903 829 ntBASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-7A0A075B6B0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm13418-201ENSMUST00000119097 944 ntBASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm15173-201ENSMUST00000122049 433 ntBASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Trav6d-7A0A075B6B0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6d-7A0A075B6B0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms