Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav18A0A075B656 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.27□□□□□ -0.44
Trav18A0A075B656 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav18A0A075B656 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.27□□□□□ -0.45
Trav18A0A075B656 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.27□□□□□ -0.45
Trav18A0A075B656 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav18A0A075B656 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Gm4535-201ENSMUST00000182274 558 ntBASIC12.26□□□□□ -0.45
Trav18A0A075B656 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.26□□□□□ -0.45
Trav18A0A075B656 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Gm10355-201ENSMUST00000097146 517 ntBASIC12.26□□□□□ -0.45
Trav18A0A075B656 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav18A0A075B656 Carlr-201ENSMUST00000181515 2574 ntBASIC12.25□□□□□ -0.45
Trav18A0A075B656 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms