Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.58□□□□□ -0.56
Trav16A0A075B653 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.57□□□□□ -0.56
Trav16A0A075B653 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.57□□□□□ -0.56
Trav16A0A075B653 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.57□□□□□ -0.56
Trav16A0A075B653 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.57□□□□□ -0.56
Trav16A0A075B653 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Trav16A0A075B653 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16A0A075B653 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.56□□□□□ -0.56
Trav16A0A075B653 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16A0A075B653 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms