Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Gm18421-201ENSMUST00000204122 625 ntBASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav8-1A0A075B641 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav8-1A0A075B641 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms