Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm14722-201ENSMUST00000118943 689 ntBASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm12008-201ENSMUST00000117791 755 ntBASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Mir1668-201ENSMUST00000184114 107 ntBASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm7556-201ENSMUST00000201178 1084 ntBASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16d-dv11A0A075B617 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms