Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav4n-4A0A075B615 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav4n-4A0A075B615 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav4n-4A0A075B615 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms