Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-1A0A075B601 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm13418-201ENSMUST00000119097 944 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm4535-201ENSMUST00000182274 558 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm7977-201ENSMUST00000193787 748 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44357-201ENSMUST00000195897 142 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm19658-201ENSMUST00000196231 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44367-201ENSMUST00000196836 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44350-201ENSMUST00000197197 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44390-201ENSMUST00000197533 144 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44313-201ENSMUST00000198018 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44486-201ENSMUST00000198508 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44314-201ENSMUST00000199263 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44394-201ENSMUST00000199558 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44484-201ENSMUST00000199873 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44466-201ENSMUST00000200264 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm44359-201ENSMUST00000200671 138 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm10355-201ENSMUST00000097146 517 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-1A0A075B601 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Gm28033-201ENSMUST00000184224 96 ntBASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.68□□□□□ -0.54
Trav9-1A0A075B601 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms