Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm14701-201ENSMUST00000117156 348 ntBASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-1A0A075B5Z7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm44335-201ENSMUST00000196879 141 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm44297-201ENSMUST00000198304 141 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm44346-201ENSMUST00000198851 141 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm5312-201ENSMUST00000203728 547 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-1A0A075B5Z7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms