Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm9229-201ENSMUST00000222777 126 ntBASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Gm15823-201ENSMUST00000064305 670 ntBASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac6Q9Z2V5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Gm12091-201ENSMUST00000146791 830 ntBASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac6Q9Z2V5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Hdac6Q9Z2V5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Gm8749-201ENSMUST00000117737 331 ntBASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Gm21854-201ENSMUST00000179901 471 ntBASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.64■□□□□ 0.57
Hdac6Q9Z2V5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac6Q9Z2V5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Gm10766-202ENSMUST00000194123 606 ntBASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Gm37917-201ENSMUST00000194711 392 ntBASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac6Q9Z2V5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.61■□□□□ 0.57
Hdac6Q9Z2V5 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms