Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
ClcnkaQ9WUB7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Gm12350-201ENSMUST00000121208 462 ntBASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ClcnkaQ9WUB7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ClcnkaQ9WUB7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms