Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Gm14127-201ENSMUST00000117906 678 ntBASIC13.22□□□□□ -0.29
Nubp1Q9R060 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.22□□□□□ -0.29
Nubp1Q9R060 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.21□□□□□ -0.29
Nubp1Q9R060 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp1Q9R060 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Nubp1Q9R060 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm15626-201ENSMUST00000117478 868 ntBASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm6257-201ENSMUST00000163864 910 ntBASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm38217-201ENSMUST00000194358 910 ntBASIC13.2□□□□□ -0.3
Nubp1Q9R060 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp1Q9R060 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms