Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1fQ9JIS7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1fQ9JIS7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Gm28760-201ENSMUST00000185995 736 ntBASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.8■□□□□ 0.28
Cacna1fQ9JIS7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Gm12585-201ENSMUST00000117307 290 ntBASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Gm23984-201ENSMUST00000157139 203 ntBASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1fQ9JIS7 Mir1894-201ENSMUST00000122802 81 ntBASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gm10766-202ENSMUST00000194123 606 ntBASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gm6916-202ENSMUST00000205523 195 ntBASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gm43433-201ENSMUST00000196573 481 ntBASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1fQ9JIS7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1fQ9JIS7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1fQ9JIS7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1fQ9JIS7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1fQ9JIS7 Gm8749-201ENSMUST00000117737 331 ntBASIC16.77■□□□□ 0.27
Cacna1fQ9JIS7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.77■□□□□ 0.27
Cacna1fQ9JIS7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1fQ9JIS7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1fQ9JIS7 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms