Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.79□□□□□ -0.2
Dap3Q9ER88 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dap3Q9ER88 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Gm6659-201ENSMUST00000174752 547 ntBASIC13.78□□□□□ -0.2
Dap3Q9ER88 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dap3Q9ER88 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Dap3Q9ER88 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Gm15794-201ENSMUST00000120182 631 ntBASIC13.77□□□□□ -0.21
Dap3Q9ER88 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Mir7071-201ENSMUST00000184847 69 ntBASIC13.77□□□□□ -0.21
Dap3Q9ER88 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.77□□□□□ -0.21
Dap3Q9ER88 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
Dap3Q9ER88 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Dap3Q9ER88 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms