Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lime1Q9EQR5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lime1Q9EQR5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lime1Q9EQR5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lime1Q9EQR5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lime1Q9EQR5 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lime1Q9EQR5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gm9682-201ENSMUST00000197505 556 ntBASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.01□□□□□ -0.33
Lime1Q9EQR5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms