Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gm27300-201ENSMUST00000184085 97 ntBASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gm27335-201ENSMUST00000184758 97 ntBASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Cdc40Q9DC48 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Gm25911-201ENSMUST00000157621 56 ntBASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Gm9682-201ENSMUST00000197505 556 ntBASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdc40Q9DC48 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Gm26308-201ENSMUST00000157768 69 ntBASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cdc40Q9DC48 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdc40Q9DC48 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms