Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp4bQ9D8B3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Gm12350-201ENSMUST00000121208 462 ntBASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp4bQ9D8B3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp4bQ9D8B3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp4bQ9D8B3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Gm27628-201ENSMUST00000184911 107 ntBASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Gm2272-201ENSMUST00000194903 582 ntBASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Gm2651-201ENSMUST00000203560 838 ntBASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp4bQ9D8B3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Gm12008-201ENSMUST00000117791 755 ntBASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Gm18733-201ENSMUST00000173950 856 ntBASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp4bQ9D8B3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms