Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4cQ9D7F7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Gm8318-201ENSMUST00000182954 872 ntBASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4cQ9D7F7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Gm24589-201ENSMUST00000116692 94 ntBASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4cQ9D7F7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm10499-201ENSMUST00000174094 934 ntBASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm4535-201ENSMUST00000182274 558 ntBASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm10355-201ENSMUST00000097146 517 ntBASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4cQ9D7F7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms