Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc7Q9D541 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Ccdc7Q9D541 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc7Q9D541 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc7Q9D541 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc7Q9D541 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc7Q9D541 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Gm15173-201ENSMUST00000122049 433 ntBASIC17.51■□□□□ 0.39
Ccdc7Q9D541 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
Ccdc7Q9D541 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc7Q9D541 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc7Q9D541 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc7Q9D541 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms