Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd1Q9D0E3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Gm15460-201ENSMUST00000118147 391 ntBASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Gm6334-201ENSMUST00000207083 228 ntBASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd1Q9D0E3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Lysmd1Q9D0E3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.83■□□□□ 0.13
Lysmd1Q9D0E3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Lysmd1Q9D0E3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lysmd1Q9D0E3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Gm37008-201ENSMUST00000195712 319 ntBASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd1Q9D0E3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Gm22018-201ENSMUST00000104357 131 ntBASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 B9d1os-201ENSMUST00000137010 674 ntBASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Gm43947-201ENSMUST00000203019 959 ntBASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd1Q9D0E3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd1Q9D0E3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms