Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Matn2-206ENSMUST00000228570 2798 ntBASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ddx47Q9CWX9 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx47Q9CWX9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx47Q9CWX9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx47Q9CWX9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms