Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Gm18622-201ENSMUST00000219361 595 ntBASIC16.77■□□□□ 0.28
Smc1aQ9CU62 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1aQ9CU62 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.76■□□□□ 0.27
Smc1aQ9CU62 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1aQ9CU62 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Gm11764-201ENSMUST00000120221 623 ntBASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Mir3113-201ENSMUST00000175478 76 ntBASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Mir8117-201ENSMUST00000184773 107 ntBASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1aQ9CU62 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Gm27646-201ENSMUST00000183989 110 ntBASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Gm10175-201ENSMUST00000086013 645 ntBASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1aQ9CU62 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.73■□□□□ 0.27
Smc1aQ9CU62 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms