Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Rer1Q9CQU3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Gm10499-201ENSMUST00000174094 934 ntBASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.27□□□□□ -0.45
Rer1Q9CQU3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rer1Q9CQU3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rer1Q9CQU3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms