Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.87□□□□□ -0.03
Trim33Q99PP7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.86□□□□□ -0.03
Trim33Q99PP7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.86□□□□□ -0.03
Trim33Q99PP7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim33Q99PP7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.86□□□□□ -0.03
Trim33Q99PP7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim33Q99PP7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.85□□□□□ -0.03
Trim33Q99PP7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.85□□□□□ -0.03
Trim33Q99PP7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.85□□□□□ -0.03
Trim33Q99PP7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.85□□□□□ -0.03
Trim33Q99PP7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim33Q99PP7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Gm1401-201ENSMUST00000122048 772 ntBASIC14.84□□□□□ -0.03
Trim33Q99PP7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.84□□□□□ -0.03
Trim33Q99PP7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.84□□□□□ -0.03
Trim33Q99PP7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms