Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh15Q99PJ1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 Gm27514-201ENSMUST00000183692 110 ntBASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 Mir8109-201ENSMUST00000184375 117 ntBASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.26
Pcdh15Q99PJ1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh15Q99PJ1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Gm10012-201ENSMUST00000078252 192 ntBASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh15Q99PJ1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 App-207ENSMUST00000227737 2827 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Gm13689-201ENSMUST00000119360 685 ntBASIC16.62■□□□□ 0.25
Pcdh15Q99PJ1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms