Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rtn4rQ99PI8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Gm44492-201ENSMUST00000197012 141 ntBASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Rtn4rQ99PI8 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rtn4rQ99PI8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rtn4rQ99PI8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.2□□□□□ -0.3
Rtn4rQ99PI8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms