Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Gm715-201ENSMUST00000117865 831 ntBASIC12.8□□□□□ -0.36
Smim3Q99PE5 Gm16061-201ENSMUST00000122167 857 ntBASIC12.8□□□□□ -0.36
Smim3Q99PE5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim3Q99PE5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.79□□□□□ -0.36
Smim3Q99PE5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Grk6-207ENSMUST00000225925 2769 ntBASIC12.79□□□□□ -0.36
Smim3Q99PE5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim3Q99PE5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.78□□□□□ -0.36
Smim3Q99PE5 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.78□□□□□ -0.36
Smim3Q99PE5 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.78□□□□□ -0.36
Smim3Q99PE5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim3Q99PE5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim3Q99PE5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms