Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trem2Q99NH8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trem2Q99NH8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trem2Q99NH8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trem2Q99NH8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Gm8749-201ENSMUST00000117737 331 ntBASIC15.23■□□□□ 0.03
Trem2Q99NH8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.23■□□□□ 0.03
Trem2Q99NH8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.23■□□□□ 0.03
Trem2Q99NH8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.23■□□□□ 0.03
Trem2Q99NH8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trem2Q99NH8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.22■□□□□ 0.03
Trem2Q99NH8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trem2Q99NH8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.21■□□□□ 0.03
Trem2Q99NH8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trem2Q99NH8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trem2Q99NH8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trem2Q99NH8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trem2Q99NH8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trem2Q99NH8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms