Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Msh4Q99MT2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.6□□□□□ -0.07
Msh4Q99MT2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.6□□□□□ -0.07
Msh4Q99MT2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.6□□□□□ -0.07
Msh4Q99MT2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh4Q99MT2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.59□□□□□ -0.07
Msh4Q99MT2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Efs-202ENSMUST00000227037 2540 ntBASIC14.59□□□□□ -0.07
Msh4Q99MT2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh4Q99MT2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Msh4Q99MT2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Msh4Q99MT2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Msh4Q99MT2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Msh4Q99MT2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Msh4Q99MT2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh4Q99MT2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh4Q99MT2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.58□□□□□ -0.08
Msh4Q99MT2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.58□□□□□ -0.08
Msh4Q99MT2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms