Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm11543-201ENSMUST00000120758 370 ntBASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm18624-201ENSMUST00000220966 658 ntBASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col25a1Q99MQ5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm37424-201ENSMUST00000191727 561 ntBASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm37714-201ENSMUST00000194742 342 ntBASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col25a1Q99MQ5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gm18766-201ENSMUST00000189811 808 ntBASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gm36967-201ENSMUST00000193814 266 ntBASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col25a1Q99MQ5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col25a1Q99MQ5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col25a1Q99MQ5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col25a1Q99MQ5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col25a1Q99MQ5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col25a1Q99MQ5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms