Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.73■□□□□ 0.11
Clp1Q99LI9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Gm14042-201ENSMUST00000120139 833 ntBASIC15.73■□□□□ 0.11
Clp1Q99LI9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Gm6745-201ENSMUST00000199216 526 ntBASIC15.73■□□□□ 0.11
Clp1Q99LI9 Gm20445-201ENSMUST00000061905 565 ntBASIC15.73■□□□□ 0.11
Clp1Q99LI9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.73■□□□□ 0.11
Clp1Q99LI9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.72■□□□□ 0.11
Clp1Q99LI9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.72■□□□□ 0.11
Clp1Q99LI9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clp1Q99LI9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.71■□□□□ 0.11
Clp1Q99LI9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Gm23984-201ENSMUST00000157139 203 ntBASIC15.71■□□□□ 0.11
Clp1Q99LI9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.71■□□□□ 0.11
Clp1Q99LI9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clp1Q99LI9 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.71■□□□□ 0.1
Clp1Q99LI9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Clp1Q99LI9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Clp1Q99LI9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clp1Q99LI9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm6912-201ENSMUST00000117218 544 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm6222-201ENSMUST00000120787 396 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.7■□□□□ 0.1
Clp1Q99LI9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm27631-201ENSMUST00000184163 466 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm42612-201ENSMUST00000197986 623 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm18018-201ENSMUST00000198273 408 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm43170-201ENSMUST00000199827 612 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Gm45098-201ENSMUST00000207179 657 ntBASIC15.7■□□□□ 0.1
Clp1Q99LI9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms