Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.07■□□□□ 0
Smarcd2Q99JR8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.07■□□□□ 0
Smarcd2Q99JR8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcd2Q99JR8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.06■□□□□ 0
Smarcd2Q99JR8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.06■□□□□ 0
Smarcd2Q99JR8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Shd-206ENSMUST00000225145 998 ntBASIC15.06■□□□□ 0
Smarcd2Q99JR8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.06■□□□□ 0
Smarcd2Q99JR8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Smarcd2Q99JR8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcd2Q99JR8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smarcd2Q99JR8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcd2Q99JR8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.05■□□□□ 0
Smarcd2Q99JR8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.05■□□□□ -0
Smarcd2Q99JR8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd2Q99JR8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.04■□□□□ -0
Smarcd2Q99JR8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms