Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.13■□□□□ 0.01
Cdk9Q99J95 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdk9Q99J95 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.11■□□□□ 0.01
Cdk9Q99J95 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdk9Q99J95 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Gm6623-201ENSMUST00000173570 544 ntBASIC15.1■□□□□ 0.01
Cdk9Q99J95 Gm29518-201ENSMUST00000190858 372 ntBASIC15.1■□□□□ 0.01
Cdk9Q99J95 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdk9Q99J95 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Gm17808-201ENSMUST00000200859 894 ntBASIC15.09■□□□□ 0.01
Cdk9Q99J95 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cdk9Q99J95 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdk9Q99J95 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms