Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm15358-201ENSMUST00000119249 520 ntBASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm17808-201ENSMUST00000200859 894 ntBASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Gm25745-201ENSMUST00000174945 133 ntBASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd1Q99J36 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms