Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.64■□□□□ 0.41
Col20a1Q923P0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Mir7023-201ENSMUST00000185093 64 ntBASIC17.63■□□□□ 0.41
Col20a1Q923P0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col20a1Q923P0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Asic1-205ENSMUST00000228185 1818 ntBASIC17.62■□□□□ 0.41
Col20a1Q923P0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm6415-201ENSMUST00000118488 348 ntBASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm13015-201ENSMUST00000118674 204 ntBASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.62■□□□□ 0.41
Col20a1Q923P0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col20a1Q923P0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.61■□□□□ 0.41
Col20a1Q923P0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.61■□□□□ 0.41
Col20a1Q923P0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.61■□□□□ 0.41
Col20a1Q923P0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.61■□□□□ 0.41
Col20a1Q923P0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Gm5479-201ENSMUST00000160578 435 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms