Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Mir1895-201ENSMUST00000122615 79 ntBASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Rpph1-201ENSMUST00000175096 319 ntBASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Gm45612-201ENSMUST00000211320 160 ntBASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha11Q91Y19 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Gm26308-201ENSMUST00000157768 69 ntBASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha11Q91Y19 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Gm20553-201ENSMUST00000204205 844 ntBASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Chchd1-203ENSMUST00000224633 557 ntBASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha11Q91Y19 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms