Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm5264-201ENSMUST00000190584 848 ntBASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha3Q91Y16 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdha3Q91Y16 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdha3Q91Y16 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Gm10499-201ENSMUST00000174094 934 ntBASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha3Q91Y16 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gm18246-201ENSMUST00000221023 728 ntBASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha3Q91Y16 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms