Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gm12008-201ENSMUST00000117791 755 ntBASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gm18733-201ENSMUST00000173950 856 ntBASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb1Q91Y08 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb1Q91Y08 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms