Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm45525-201ENSMUST00000210800 389 ntBASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 AC154595.1-201ENSMUST00000225533 1059 ntBASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb20Q91XZ9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 AC118006.2-201ENSMUST00000224167 962 ntBASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb20Q91XZ9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gm17271-201ENSMUST00000165535 355 ntBASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Gm28359-201ENSMUST00000187470 1322 ntBASIC14.6□□□□□ -0.07
Pcdhb20Q91XZ9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms