Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.1■□□□□ 0.33
Trex1Q91XB0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Gm27533-201ENSMUST00000183800 152 ntBASIC17.1■□□□□ 0.33
Trex1Q91XB0 Mir7684-201ENSMUST00000183858 60 ntBASIC17.1■□□□□ 0.33
Trex1Q91XB0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.1■□□□□ 0.33
Trex1Q91XB0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.09■□□□□ 0.33
Trex1Q91XB0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Gm9063-201ENSMUST00000223299 582 ntBASIC17.09■□□□□ 0.33
Trex1Q91XB0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trex1Q91XB0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trex1Q91XB0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trex1Q91XB0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trex1Q91XB0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trex1Q91XB0 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.08■□□□□ 0.33
Trex1Q91XB0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trex1Q91XB0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trex1Q91XB0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm14767-201ENSMUST00000121559 586 ntBASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm5866-201ENSMUST00000177881 973 ntBASIC17.08■□□□□ 0.32
Trex1Q91XB0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm2423-201ENSMUST00000074863 733 ntBASIC17.08■□□□□ 0.32
Trex1Q91XB0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.08■□□□□ 0.32
Trex1Q91XB0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trex1Q91XB0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.07■□□□□ 0.32
Trex1Q91XB0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trex1Q91XB0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms