Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.81□□□□□ -0.04
Vsx1Q91V10 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Gm8318-201ENSMUST00000182954 872 ntBASIC14.81□□□□□ -0.04
Vsx1Q91V10 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Gm9063-201ENSMUST00000223299 582 ntBASIC14.81□□□□□ -0.04
Vsx1Q91V10 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.81□□□□□ -0.04
Vsx1Q91V10 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.81□□□□□ -0.04
Vsx1Q91V10 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gm13015-201ENSMUST00000118674 204 ntBASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gm14928-201ENSMUST00000120198 477 ntBASIC14.8□□□□□ -0.04
Vsx1Q91V10 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gm25857-201ENSMUST00000082788 129 ntBASIC14.8□□□□□ -0.04
Vsx1Q91V10 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vsx1Q91V10 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Gm10499-201ENSMUST00000174094 934 ntBASIC14.79□□□□□ -0.04
Vsx1Q91V10 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Gm28630-201ENSMUST00000187806 498 ntBASIC14.79□□□□□ -0.04
Vsx1Q91V10 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vsx1Q91V10 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms